HL_4V7M_036
3D structure
- PDB id
- 4V7M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of Capreomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.45 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7M_036 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.1034
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4V7M|1|AX|G|31
4V7M|1|AX|C|32
4V7M|1|AX|U|33
4V7M|1|AX|C|34
4V7M|1|AX|A|35
4V7M|1|AX|U|36
4V7M|1|AX|A|37
4V7M|1|AX|A|38
4V7M|1|AX|C|39
Current chains
- Chain AX
- tRNA-Met
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AI
- 30S ribosomal protein S9
- Chain AM
- 30S ribosomal protein S13
- Chain AV
- RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')
- Chain AY
- Transfer RNA; tRNA
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