HL_4V7R_009
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7R_009 not in the Motif Atlas
- Homologous match to HL_4V88_195
- Geometric discrepancy: 0.2435
- The information below is about HL_4V88_195
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4V7R|1|A1|C|393
4V7R|1|A1|C|394
4V7R|1|A1|U|395
4V7R|1|A1|G|396
4V7R|1|A1|A|397
4V7R|1|A1|G|398
4V7R|1|A1|A|399
4V7R|1|A1|A|400
4V7R|1|A1|A|401
4V7R|1|A1|C|402
4V7R|1|A1|G|403
4V7R|1|A1|G|404
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: