HL_4V7R_044
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 4V7R|1|B1|A|284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7R_044 not in the Motif Atlas
- Homologous match to HL_8C3A_008
- Geometric discrepancy: 0.3408
- The information below is about HL_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
4V7R|1|B1|U|278
4V7R|1|B1|U|279
4V7R|1|B1|U|280
4V7R|1|B1|G|281
4V7R|1|B1|G|282
4V7R|1|B1|G|283
4V7R|1|B1|A|284
4V7R|1|B1|A|285
4V7R|1|B1|U|286
4V7R|1|B1|G|287
Current chains
- Chain B1
- 25S ribosomal RNA
Nearby chains
- Chain BO
- 60S ribosomal protein L15-A
- Chain BY
- 60S ribosomal protein L28
- Chain Bf
- 60S ribosomal protein L42
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