HL_4V7R_086
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- UCUAAUUAG
- Length
- 9 nucleotides
- Bulged bases
- 4V7R|1|B1|U|2298
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7R_086 not in the Motif Atlas
- Homologous match to HL_5TBW_050
- Geometric discrepancy: 0.2047
- The information below is about HL_5TBW_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
4V7R|1|B1|U|2292
4V7R|1|B1|C|2293
4V7R|1|B1|U|2294
4V7R|1|B1|A|2295
4V7R|1|B1|A|2296
4V7R|1|B1|U|2297
4V7R|1|B1|U|2298
4V7R|1|B1|A|2299
4V7R|1|B1|G|2300
Current chains
- Chain B1
- 25S ribosomal RNA
Nearby chains
- Chain A1
- Small subunit ribosomal RNA; SSU rRNA
- Chain BU
- 60S ribosomal protein L23
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