HL_4V7R_178
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- UGUAACAA
- Length
- 8 nucleotides
- Bulged bases
- 4V7R|1|D1|G|1268
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7R_178 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.2864
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
4V7R|1|D1|U|1267
4V7R|1|D1|G|1268
4V7R|1|D1|U|1269
4V7R|1|D1|A|1270
4V7R|1|D1|A|1271
4V7R|1|D1|C|1272
4V7R|1|D1|A|1273
4V7R|1|D1|A|1274
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
- Chain DL
- 60S ribosomal protein L12
Coloring options: