HL_4V7R_203

3D structure

PDB id

4V7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Yeast 80S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

4 Å

Loop

Sequence

AUUCAUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V7R_203 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.3506

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86870.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

4V7R|1|D1|A|2536
4V7R|1|D1|U|2537
4V7R|1|D1|U|2538
4V7R|1|D1|C|2539
4V7R|1|D1|A|2540
4V7R|1|D1|U|2541
4V7R|1|D1|U|2542
4V7R|1|D1|U|2543

Current chains

Chain D1

25S ribosomal RNA

Nearby chains