HL_4V7R_218
3D structure
- PDB id
- 4V7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4 Å
Loop
- Sequence
- CUGAACGCCUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 4V7R|1|D1|G|3116
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V7R_218 not in the Motif Atlas
- Homologous match to HL_5TBW_067
- Geometric discrepancy: 0.2163
- The information below is about HL_5TBW_067
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.9
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
4V7R|1|D1|C|3110
4V7R|1|D1|U|3111
4V7R|1|D1|G|3112
4V7R|1|D1|A|3113
4V7R|1|D1|A|3114
4V7R|1|D1|C|3115
4V7R|1|D1|G|3116
4V7R|1|D1|C|3117
4V7R|1|D1|C|3118
4V7R|1|D1|U|3119
4V7R|1|D1|C|3120
4V7R|1|D1|U|3121
4V7R|1|D1|A|3122
4V7R|1|D1|A|3123
4V7R|1|D1|G|3124
Current chains
- Chain D1
- 25S ribosomal RNA
Nearby chains
- Chain DI
- 60S ribosomal protein L9-A
- Chain DP
- 60S ribosomal protein L16-A
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