HL_4V85_044

3D structure

PDB id

4V85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

4V85|1|BA|G|386, 4V85|1|BA|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V85_044 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1074

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4V85|1|BA|A|382
4V85|1|BA|C|383
4V85|1|BA|A|384
4V85|1|BA|C|385
4V85|1|BA|G|386
4V85|1|BA|U|387
4V85|1|BA|G|388
4V85|1|BA|G|389
4V85|1|BA|U|390
4V85|1|BA|A|391
4V85|1|BA|U|392

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B1

50S ribosomal protein L28