HL_4V8C_054
3D structure
- PDB id
- 4V8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGAUG
- Length
- 6 nucleotides
- Bulged bases
- 4V8C|1|AA|U|2213
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8C_054 not in the Motif Atlas
- Geometric match to HL_5TBW_004
- Geometric discrepancy: 0.3139
- The information below is about HL_5TBW_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86929.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 9
Unit IDs
4V8C|1|AA|C|2209
4V8C|1|AA|G|2210
4V8C|1|AA|G|2211
4V8C|1|AA|A|2212
4V8C|1|AA|U|2213
4V8C|1|AA|G|2215
Current chains
- Chain AA
- RNA (2912-MER)
Nearby chains
- Chain AD
- 50S ribosomal protein L2
- Chain AZ
- 50S ribosomal protein L28
Coloring options: