HL_4V8C_091
3D structure
- PDB id
- 4V8C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 4V8C|1|BA|C|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8C_091 not in the Motif Atlas
- Geometric match to HL_7RQB_018
- Geometric discrepancy: 0.067
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
4V8C|1|BA|U|566
4V8C|1|BA|A|567
4V8C|1|BA|U|568
4V8C|1|BA|U|569
4V8C|1|BA|G|570
4V8C|1|BA|A|571
4V8C|1|BA|A|572
4V8C|1|BA|G|573
4V8C|1|BA|C|574
4V8C|1|BA|A|575
Current chains
- Chain BA
- RNA (2912-MER)
Nearby chains
- Chain B2
- 50S ribosomal protein L21
- Chain B5
- 50S ribosomal protein L32
- Chain BE
- 50S ribosomal protein L3
- Chain BO
- 50S ribosomal protein L15
Coloring options: