HL_4V8J_125
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 4V8J|1|CA|U|776
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8J_125 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.0819
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4V8J|1|CA|G|769
4V8J|1|CA|A|770
4V8J|1|CA|U|771
4V8J|1|CA|U|772
4V8J|1|CA|A|773
4V8J|1|CA|G|774
4V8J|1|CA|A|775
4V8J|1|CA|U|776
4V8J|1|CA|A|777
4V8J|1|CA|C|778
4V8J|1|CA|C|779
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CK
- 30S ribosomal protein S11
- Chain CV
- Transfer RNA; tRNA
- Chain CW
- Transfer RNA; tRNA
- Chain CX
- messenger RNA
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: