HL_4V8J_220
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAUUGAAAAUCC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8J_220 not in the Motif Atlas
- Homologous match to HL_4WT8_136
- Geometric discrepancy: 0.2663
- The information below is about HL_4WT8_136
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06285.3
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4V8J|1|AW|G|29
4V8J|1|AW|G|30
4V8J|1|AW|A|31
4V8J|1|AW|U|32
4V8J|1|AW|U|33
4V8J|1|AW|G|34
4V8J|1|AW|A|35
4V8J|1|AW|A|36
4V8J|1|AW|A|37
4V8J|1|AW|A|38
4V8J|1|AW|U|39
4V8J|1|AW|C|40
4V8J|1|AW|C|41
Current chains
- Chain AW
- tRNA-Phe
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 30S ribosomal protein S7
- Chain AK
- 30S ribosomal protein S11
- Chain AV
- Transfer RNA; tRNA
- Chain AX
- messenger RNA
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