HL_4V8J_239
3D structure
- PDB id
- 4V8J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome ram mutation G347U.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GGUAAUGGC
- Length
- 9 nucleotides
- Bulged bases
- 4V8J|1|CA|G|261
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V8J_239 not in the Motif Atlas
- Homologous match to HL_4LFB_006
- Geometric discrepancy: 0.1234
- The information below is about HL_4LFB_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
4V8J|1|CA|G|254
4V8J|1|CA|G|255
4V8J|1|CA|U|256
4V8J|1|CA|A|257
4V8J|1|CA|A|258
4V8J|1|CA|U|259
4V8J|1|CA|G|260
4V8J|1|CA|G|261
4V8J|1|CA|C|262
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CQ
- 30S ribosomal protein S17
- Chain CT
- 30S ribosomal protein S20
Coloring options: