HL_4V8P_108
3D structure
- PDB id
- 4V8P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- CUUAAAUG
- Length
- 8 nucleotides
- Bulged bases
- 4V8P|1|D1|A|1109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_54035.2
- Basepair signature
- cWW-cWW-R-tSH-R
- Number of instances in this motif group
- 10
Unit IDs
4V8P|1|D1|C|1104
4V8P|1|D1|U|1105
4V8P|1|D1|U|1106
4V8P|1|D1|A|1107
4V8P|1|D1|A|1108
4V8P|1|D1|A|1109
4V8P|1|D1|U|1110
4V8P|1|D1|G|1111
Current chains
- Chain D1
- 26S RRNA
Nearby chains
- Chain CM
- 60S RIBOSOMAL PROTEIN L5
- Chain CP
- 60S RIBOSOMAL PROTEIN L21
- Chain DT
- RPL29
Coloring options: