HL_4V8P_128
3D structure
- PDB id
- 4V8P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- UUUAAUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 4V8P|1|D1|A|2134, 4V8P|1|D1|A|2135, 4V8P|1|D1|U|2136, 4V8P|1|D1|A|2140
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.2
- Basepair signature
- cWW-tWH-tWH-R
- Number of instances in this motif group
- 6
Unit IDs
4V8P|1|D1|U|2131
4V8P|1|D1|U|2132
4V8P|1|D1|U|2133
4V8P|1|D1|A|2134
4V8P|1|D1|A|2135
4V8P|1|D1|U|2136
4V8P|1|D1|A|2137
4V8P|1|D1|A|2138
4V8P|1|D1|A|2139
4V8P|1|D1|A|2140
4V8P|1|D1|A|2141
Current chains
- Chain D1
- 26S RRNA
Nearby chains
- Chain CA
- RPL8
- Chain DA
- RIBOSOMAL PROTEIN L37
Coloring options: