HL_4V8P_200
3D structure
- PDB id
- 4V8P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- CGCAUCAG
- Length
- 8 nucleotides
- Bulged bases
- 4V8P|1|F1|C|1870, 4V8P|1|F1|U|1872, 4V8P|1|F1|A|1874
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_55724.1
- Basepair signature
- cWW-R-R
- Number of instances in this motif group
- 18
Unit IDs
4V8P|1|F1|C|1868
4V8P|1|F1|G|1869
4V8P|1|F1|C|1870
4V8P|1|F1|A|1871
4V8P|1|F1|U|1872
4V8P|1|F1|C|1873
4V8P|1|F1|A|1874
4V8P|1|F1|G|1875
Current chains
- Chain F1
- 26S RRNA
Nearby chains
- Chain EC
- RPL4
- Chain EQ
- RPL17
- Chain FA
- RIBOSOMAL PROTEIN L37
- Chain FB
- RPL39
Coloring options: