HL_4V91_008

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUGGGAAUG

Length

10 nucleotides

Bulged bases

4V91|1|1|G|283, 4V91|1|1|A|284, 4V91|1|1|A|285

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06138.1

Basepair signature

cWW-cWW-R-R-R

Number of instances in this motif group

18

Unit IDs

4V91|1|1|U|278
4V91|1|1|U|279
4V91|1|1|U|280
4V91|1|1|G|281
4V91|1|1|G|282
4V91|1|1|G|283
4V91|1|1|A|284
4V91|1|1|A|285
4V91|1|1|U|286
4V91|1|1|G|287

Current chains

Chain 1

25S RRNA

Nearby chains

Chain L

EL13

Chain N

EL15

Chain a

UL15

Chain o

EL42