HL_4V91_029

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUGAUAUGAUG

Length

11 nucleotides

Bulged bases

4V91|1|1|G|1354, 4V91|1|1|U|1356

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_29344.1

Basepair signature

cWW-R-R-R-R-R-R

Number of instances in this motif group

2

Unit IDs

4V91|1|1|U|1347
4V91|1|1|U|1348
4V91|1|1|G|1349
4V91|1|1|A|1350
4V91|1|1|U|1351
4V91|1|1|A|1352
4V91|1|1|U|1353
4V91|1|1|G|1354
4V91|1|1|A|1355
4V91|1|1|U|1356
4V91|1|1|G|1357

Current chains

Chain 1

25S RRNA

Nearby chains

Chain C

UL4

Chain E

EL6

Chain Q

EL18

Chain e

EL32