Motif HL_29344.1 Version HL_29344.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V88_142 | 4V88 | 0.0000 | 2 | A5 | LSU rRNA | U | 1347 | U | 1348 | G | 1349 | A | 1350 | U | 1351 | A | 1352 | U | 1353 | A | 1355 | G | 1357 | cWW |
| 2 | HL_4V91_029 | 4V91 | 0.8374 | 2 | 1 | LSU rRNA | U | 1347 | U | 1348 | G | 1349 | A | 1350 | U | 1351 | A | 1352 | U | 1353 | A | 1355 | G | 1357 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUGAUAUGAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAUAUGAU | 2 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R-R-R
- Heat map statistics
- Min 0.84 | Avg 0.42 | Max 0.84
Coloring options: