HL_4V91_034

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCUGAUUUUAUGCAGG

Length

16 nucleotides

Bulged bases

4V91|1|1|U|1569

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48953.1

Basepair signature

cWW-R-R-R-R-R-R-R-R-R-R-R-R

Number of instances in this motif group

4

Unit IDs

4V91|1|1|C|1562
4V91|1|1|C|1563
4V91|1|1|U|1564
4V91|1|1|G|1565
4V91|1|1|A|1566
4V91|1|1|U|1567
4V91|1|1|U|1568
4V91|1|1|U|1569
4V91|1|1|U|1570
4V91|1|1|A|1571
4V91|1|1|U|1572
4V91|1|1|G|1573
4V91|1|1|C|1574
4V91|1|1|A|1575
4V91|1|1|G|1576
4V91|1|1|G|1577

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 4

5.8S ribosomal RNA; 5.8S rRNA

Chain X

UL23