HL_4V91_056

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUAAACGAUAACG

Length

13 nucleotides

Bulged bases

4V91|1|1|A|2637, 4V91|1|1|C|2644

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38117.1

Basepair signature

cWW-tSH-tHH-tWW-R-R-R

Number of instances in this motif group

15

Unit IDs

4V91|1|1|U|2633
4V91|1|1|U|2634
4V91|1|1|A|2635
4V91|1|1|A|2636
4V91|1|1|A|2637
4V91|1|1|C|2638
4V91|1|1|G|2639
4V91|1|1|A|2640
4V91|1|1|U|2641
4V91|1|1|A|2642
4V91|1|1|A|2643
4V91|1|1|C|2644
4V91|1|1|G|2645

Current chains

Chain 1

25S RRNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain I

UL16

Chain T

EL21

Chain b

EL29