3D structure

PDB id
4V91 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UUCAGUGUG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_18683.1
Basepair signature
cWW-R-R-R-R-R-R
Number of instances in this motif group
6

Unit IDs

4V91|1|1|U|2724
4V91|1|1|U|2725
4V91|1|1|C|2726
4V91|1|1|A|2727
4V91|1|1|G|2728
4V91|1|1|U|2729
4V91|1|1|G|2730
4V91|1|1|U|2731
4V91|1|1|G|2732

Current chains

Chain 1
25S RRNA

Nearby chains

Chain Q
EL18
Chain T
EL21
Chain a
UL15
Chain o
EL42

Coloring options:

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