HL_4V91_068

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

4V91|1|1|G|3116, 4V91|1|1|C|3120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69076.1

Basepair signature

cWW-tSH-cWH-tSH-tWH-tHW-tHW-tSW

Number of instances in this motif group

12

Unit IDs

4V91|1|1|C|3110
4V91|1|1|U|3111
4V91|1|1|G|3112
4V91|1|1|A|3113
4V91|1|1|A|3114
4V91|1|1|C|3115
4V91|1|1|G|3116
4V91|1|1|C|3117
4V91|1|1|C|3118
4V91|1|1|U|3119
4V91|1|1|C|3120
4V91|1|1|U|3121
4V91|1|1|A|3122
4V91|1|1|A|3123
4V91|1|1|G|3124

Current chains

Chain 1

25S RRNA

Nearby chains

Chain H

UL6

Chain O

UL13

Chain m

EL40