HL_4V91_087

3D structure

PDB id

4V91 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUUAUCUUU

Length

9 nucleotides

Bulged bases

4V91|1|1|U|1687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V91_087 not in the Motif Atlas

Homologous match to HL_8P9A_148

Geometric discrepancy: 0.1445

The information below is about HL_8P9A_148

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77082.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

8

Unit IDs

4V91|1|1|G|1680
4V91|1|1|U|1681
4V91|1|1|U|1682
4V91|1|1|A|1683
4V91|1|1|U|1684
4V91|1|1|C|1685
4V91|1|1|U|1686
4V91|1|1|U|1687
4V91|1|1|U|1688

Current chains

Chain 1

25S RRNA

Nearby chains

Chain R

EL19

Chain U

EL22