HL_4V92_035
3D structure
- PDB id
- 4V92 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AGUCAUCAGCU
- Length
- 11 nucleotides
- Bulged bases
- 4V92|1|A2|G|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V92_035 not in the Motif Atlas
- Geometric match to HL_5J7L_029
- Geometric discrepancy: 0.3448
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4V92|1|A2|A|1593
4V92|1|A2|G|1594
4V92|1|A2|U|1595
4V92|1|A2|C|1596
4V92|1|A2|A|1597
4V92|1|A2|U|1598
4V92|1|A2|C|1599
4V92|1|A2|A|1600
4V92|1|A2|G|1601
4V92|1|A2|C|1602
4V92|1|A2|U|1603
Current chains
- Chain A2
- 18S RRNA
Nearby chains
- Chain BP
- US19
- Chain BQ
- US9
- Chain BT
- ES19
- Chain Bd
- US14
Coloring options: