HL_4V9A_034
3D structure
- PDB id
- 4V9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of the 70S ribosome with tetracycline.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9A_034 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.0828
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4V9A|1|AC|G|31
4V9A|1|AC|C|32
4V9A|1|AC|U|33
4V9A|1|AC|C|34
4V9A|1|AC|A|35
4V9A|1|AC|U|36
4V9A|1|AC|A|37
4V9A|1|AC|A|38
4V9A|1|AC|C|39
Current chains
- Chain AC
- TRNA-FMET
Nearby chains
- Chain A1
- MRNA
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AL
- 30S RIBOSOMAL PROTEIN S9
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: