HL_4V9C_138
3D structure
- PDB id
- 4V9C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Allosteric control of the ribosome by small-molecule antibiotics
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9C_138 not in the Motif Atlas
- Homologous match to HL_4V90_033
- Geometric discrepancy: 0.1728
- The information below is about HL_4V90_033
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4V9C|1|CV|A|31
4V9C|1|CV|U|32
4V9C|1|CV|U|33
4V9C|1|CV|G|34
4V9C|1|CV|A|35
4V9C|1|CV|A|36
4V9C|1|CV|A|37
4V9C|1|CV|A|38
4V9C|1|CV|U|39
Current chains
- Chain CV
- Phenylalanine specific transfer RNA, tRNA-Phe
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CI
- 30S ribosomal protein S9
- Chain CX
- Messenger RNA, mRNA
Coloring options: