HL_4V9D_052
3D structure
- PDB id
- 4V9D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 4V9D|1|BA|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9D_052 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.0963
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4V9D|1|BA|G|786
4V9D|1|BA|A|787
4V9D|1|BA|U|788
4V9D|1|BA|U|789
4V9D|1|BA|A|790
4V9D|1|BA|G|791
4V9D|1|BA|A|792
4V9D|1|BA|U|793
4V9D|1|BA|A|794
4V9D|1|BA|C|795
4V9D|1|BA|C|796
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain BK
- 30S ribosomal protein S11
- Chain BU
- 30S ribosomal protein S21
- Chain BV
- Transfer RNA; tRNA
- Chain BX
- messenger RNA
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: