HL_4V9L_125
3D structure
- PDB id
- 4V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 4V9L|1|CA|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V9L_125 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.1931
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
4V9L|1|CA|G|786
4V9L|1|CA|A|787
4V9L|1|CA|U|788
4V9L|1|CA|U|789
4V9L|1|CA|A|790
4V9L|1|CA|G|791
4V9L|1|CA|A|792
4V9L|1|CA|U|793
4V9L|1|CA|A|794
4V9L|1|CA|C|795
4V9L|1|CA|C|796
Current chains
- Chain CA
- ribosomal RNA 16S
Nearby chains
- Chain CK
- 30S ribosomal protein S11
- Chain CV
- messenger RNA
- Chain CW
- Transfer RNA; tRNA
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
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