HL_4V9N_160

3D structure

PDB id

4V9N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UAUUGAAGCA

Length

10 nucleotides

Bulged bases

4V9N|1|DA|C|574

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9N_160 not in the Motif Atlas

Geometric match to HL_7RQB_018

Geometric discrepancy: 0.0638

The information below is about HL_7RQB_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

4V9N|1|DA|U|566
4V9N|1|DA|A|567
4V9N|1|DA|U|568
4V9N|1|DA|U|569
4V9N|1|DA|G|570
4V9N|1|DA|A|571
4V9N|1|DA|A|572
4V9N|1|DA|G|573
4V9N|1|DA|C|574
4V9N|1|DA|A|575

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D5

50S ribosomal protein L32

Chain DE

50S ribosomal protein L3

Chain DP

50S ribosomal protein L15

Chain DV

50S ribosomal protein L21