HL_4V9P_107

3D structure

PDB id

4V9P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Control of ribosomal subunit rotation by elongation factor G

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V9P_107 not in the Motif Atlas

Homologous match to HL_5J7L_138

Geometric discrepancy: 0.1904

The information below is about HL_5J7L_138

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_68257.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4V9P|1|CA|U|158
4V9P|1|CA|G|159
4V9P|1|CA|A|160
4V9P|1|CA|A|161
4V9P|1|CA|U|162
4V9P|1|CA|C|163
4V9P|1|CA|C|164
4V9P|1|CA|A|165
4V9P|1|CA|U|166
4V9P|1|CA|A|167
4V9P|1|CA|G|168

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CX

50S ribosomal protein L28