HL_4W21_061

3D structure

PDB id

4W21 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2 (this entry contains the large ribosomal subunit RNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUUCAUAG

Length

9 nucleotides

Bulged bases

4W21|1|5|U|4419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46489.7

Basepair signature

cWW-tSH-R-R-R-R

Number of instances in this motif group

10

Unit IDs

4W21|1|5|C|4417
4W21|1|5|G|4418
4W21|1|5|U|4419
4W21|1|5|U|4420
4W21|1|5|C|4421
4W21|1|5|A|4422
4W21|1|5|U|4423
4W21|1|5|A|4424
4W21|1|5|G|4425

Current chains

Chain 5

28S ribosomal RNA

Nearby chains