HL_4W29_063

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

4W29|1|BA|U|827, 4W29|1|BA|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W29_063 not in the Motif Atlas

Homologous match to HL_7RQB_025

Geometric discrepancy: 0.2195

The information below is about HL_7RQB_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53619.1

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

4W29|1|BA|U|826
4W29|1|BA|U|827
4W29|1|BA|U|828
4W29|1|BA|A|829
4W29|1|BA|G|830
4W29|1|BA|G|831

Current chains

Chain BA

23S Ribosomal RNA

Nearby chains

Chain BP

50S ribosomal protein L15