HL_4W29_115

3D structure

PDB id

4W29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

4W29|1|CA|U|201|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W29_115 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3408

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4W29|1|CA|C|201
4W29|1|CA|U|201|||A
4W29|1|CA|U|201|||B
4W29|1|CA|U|201|||C
4W29|1|CA|G|216

Current chains

Chain CA

16S Ribosomal RNA

Nearby chains