HL_4W29_165
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- CCGCAAGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W29_165 not in the Motif Atlas
- Geometric match to HL_7A0S_056
- Geometric discrepancy: 0.3765
- The information below is about HL_7A0S_056
- Detailed Annotation
- GNRA with extra cWW
- Broad Annotation
- GNRA with extra cWW
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4W29|1|DA|C|542
4W29|1|DA|C|543
4W29|1|DA|G|543|||A
4W29|1|DA|C|543|||B
4W29|1|DA|A|543|||C
4W29|1|DA|A|543|||D
4W29|1|DA|G|550
4W29|1|DA|G|551
Current chains
- Chain DA
- 23S Ribosomal RNA
Nearby chains
- Chain DN
- 50S ribosomal protein L13
- Chain DV
- 50S ribosomal protein L21
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