HL_4W29_222
3D structure
- PDB id
- 4W29 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.8 Å
Loop
- Sequence
- ACUCAUAAU
- Length
- 9 nucleotides
- Bulged bases
- 4W29|1|AW|U|33
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W29_222 not in the Motif Atlas
- Homologous match to HL_2IY5_002
- Geometric discrepancy: 0.532
- The information below is about HL_2IY5_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_83632.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4W29|1|AW|A|31
4W29|1|AW|C|32
4W29|1|AW|U|33
4W29|1|AW|C|34
4W29|1|AW|A|35
4W29|1|AW|U|36
4W29|1|AW|A|37
4W29|1|AW|A|38
4W29|1|AW|U|39
Current chains
- Chain AW
- tRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AI
- 30S ribosomal protein S9
- Chain AK
- 30S ribosomal protein S11
- Chain AM
- 30S ribosomal protein S13
- Chain AV
- mRNA
- Chain AX
- Transfer RNA; tRNA
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