HL_4W2E_066

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

4W2E|1|A|G|2751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4W2E_066 not in the Motif Atlas

Homologous match to HL_7RQB_066

Geometric discrepancy: 0.1019

The information below is about HL_7RQB_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56677.7

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

8

Unit IDs

4W2E|1|A|C|2745
4W2E|1|A|U|2746
4W2E|1|A|G|2747
4W2E|1|A|A|2748
4W2E|1|A|A|2749
4W2E|1|A|A|2750
4W2E|1|A|G|2751
4W2E|1|A|C|2752
4W2E|1|A|A|2753
4W2E|1|A|U|2754
4W2E|1|A|C|2755
4W2E|1|A|U|2756
4W2E|1|A|A|2757
4W2E|1|A|A|2758
4W2E|1|A|G|2759

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 9

50S ribosomal protein L36

Chain H

50S ribosomal protein L6

Chain N

50S ribosomal protein L13