HL_4W2F_063
3D structure
- PDB id
- 4W2F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GGAUGCAAAC
- Length
- 10 nucleotides
- Bulged bases
- 4W2F|1|BA|U|794, 4W2F|1|BA|A|798, 4W2F|1|BA|A|799
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4W2F_063 not in the Motif Atlas
- Homologous match to HL_7RQB_023
- Geometric discrepancy: 0.0439
- The information below is about HL_7RQB_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.6
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 6
Unit IDs
4W2F|1|BA|G|791
4W2F|1|BA|G|792
4W2F|1|BA|A|793
4W2F|1|BA|U|794
4W2F|1|BA|G|795
4W2F|1|BA|C|796
4W2F|1|BA|A|797
4W2F|1|BA|A|798
4W2F|1|BA|A|799
4W2F|1|BA|C|800
Current chains
- Chain BA
- 23S Ribosomal RNA
Nearby chains
- Chain B5
- 50S Ribosomal Protein L32
- Chain B7
- 50S Ribosomal Protein L34
- Chain BE
- 50S Ribosomal Protein L3
- Chain BW
- 50S Ribosomal Protein L22
Coloring options: