HL_4WF1_030
3D structure
- PDB id
- 4WF1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to negamycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.09 Å
Loop
- Sequence
- GAUCAGAAUGC
- Length
- 11 nucleotides
- Bulged bases
- 4WF1|1|AA|U|1364
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WF1_030 not in the Motif Atlas
- Homologous match to HL_5J7L_029
- Geometric discrepancy: 0.1185
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4WF1|1|AA|G|1356
4WF1|1|AA|A|1357
4WF1|1|AA|U|1358
4WF1|1|AA|C|1359
4WF1|1|AA|A|1360
4WF1|1|AA|G|1361
4WF1|1|AA|A|1362
4WF1|1|AA|A|1363
4WF1|1|AA|U|1364
4WF1|1|AA|G|1365
4WF1|1|AA|C|1366
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AI
- 30S ribosomal protein S9
- Chain AJ
- 30S ribosomal protein S10
- Chain AN
- 30S ribosomal protein S14
Coloring options: