HL_4WFB_018
3D structure
- PDB id
- 4WFB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.43 Å
Loop
- Sequence
- UUUUGUAGAA
- Length
- 10 nucleotides
- Bulged bases
- 4WFB|1|X|A|617
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WFB_018 not in the Motif Atlas
- Geometric match to HL_4WF9_018
- Geometric discrepancy: 0.0672
- The information below is about HL_4WF9_018
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
4WFB|1|X|U|609
4WFB|1|X|U|610
4WFB|1|X|U|611
4WFB|1|X|U|612
4WFB|1|X|G|613
4WFB|1|X|U|614
4WFB|1|X|A|615
4WFB|1|X|G|616
4WFB|1|X|A|617
4WFB|1|X|A|618
Current chains
- Chain X
- 23S rRNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L15
- Chain N
- 50S ribosomal protein L20
- Chain O
- 50S ribosomal protein L21
- Chain Z
- 50S ribosomal protein L32
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