HL_4WOI_204
3D structure
- PDB id
- 4WOI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UCGCGAGA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WOI_204 not in the Motif Atlas
- Geometric match to HL_2Y9H_005
- Geometric discrepancy: 0.2745
- The information below is about HL_2Y9H_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86870.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4WOI|1|DA|U|1264
4WOI|1|DA|C|1265
4WOI|1|DA|G|1266
4WOI|1|DA|C|1267
4WOI|1|DA|G|1268
4WOI|1|DA|A|1269
4WOI|1|DA|G|1270
4WOI|1|DA|A|1271
Current chains
- Chain DA
- 16S ribosomal RNA
Nearby chains
- Chain DM
- 30S ribosomal protein S13
- Chain DN
- 30S ribosomal protein S14
- Chain DS
- 30S ribosomal protein S19
Coloring options: