HL_4WQ1_015
3D structure
- PDB id
- 4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQ1_015 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.1632
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4WQ1|1|13|C|689
4WQ1|1|13|G|690
4WQ1|1|13|G|691
4WQ1|1|13|U|692
4WQ1|1|13|G|693
4WQ1|1|13|A|694
4WQ1|1|13|A|695
4WQ1|1|13|A|696
4WQ1|1|13|U|697
4WQ1|1|13|G|698
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 1H
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2I
- 30S ribosomal protein S11
- Chain 3K
- Transfer RNA; tRNA
- Chain 4K
- mRNA
- Chain 6E
- 30S ribosomal protein S7
Coloring options: