3D structure

PDB id
4WQF (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
GGAUGCAAAC
Length
10 nucleotides
Bulged bases
4WQF|1|AA|U|794, 4WQF|1|AA|A|798
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4WQF_022 not in the Motif Atlas
Homologous match to HL_7RQB_023
Geometric discrepancy: 0.0391
The information below is about HL_7RQB_023
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_39334.6
Basepair signature
cWW-cWS-tSW-F-F
Number of instances in this motif group
6

Unit IDs

4WQF|1|AA|G|791
4WQF|1|AA|G|792
4WQF|1|AA|A|793
4WQF|1|AA|U|794
4WQF|1|AA|G|795
4WQF|1|AA|C|796
4WQF|1|AA|A|797
4WQF|1|AA|A|798
4WQF|1|AA|A|799
4WQF|1|AA|C|800

Current chains

Chain AA
23S Ribosomal RNA

Nearby chains

Chain A5
50S ribosomal protein L32
Chain A7
50S ribosomal protein L34
Chain AE
50S ribosomal protein L3
Chain AW
50S ribosomal protein L22

Coloring options:


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