HL_4WQF_044

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

UUUACCAAAAA

Length

11 nucleotides

Bulged bases

4WQF|1|AA|A|1811, 4WQF|1|AA|C|1812, 4WQF|1|AA|C|1813, 4WQF|1|AA|A|1817

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_044 not in the Motif Atlas

Homologous match to HL_7RQB_045

Geometric discrepancy: 0.0501

The information below is about HL_7RQB_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.5

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

4WQF|1|AA|U|1808
4WQF|1|AA|U|1809
4WQF|1|AA|U|1810
4WQF|1|AA|A|1811
4WQF|1|AA|C|1812
4WQF|1|AA|C|1813
4WQF|1|AA|A|1814
4WQF|1|AA|A|1815
4WQF|1|AA|A|1816
4WQF|1|AA|A|1817
4WQF|1|AA|A|1818

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A7

50S ribosomal protein L34

Chain AD

50S ribosomal protein L2

Chain AW

50S ribosomal protein L22