HL_4WQY_054

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

4WQY|1|AA|A|2280, 4WQY|1|AA|C|2287

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_054 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0589

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

4WQY|1|AA|C|2276
4WQY|1|AA|U|2277
4WQY|1|AA|A|2278
4WQY|1|AA|A|2279
4WQY|1|AA|A|2280
4WQY|1|AA|A|2281
4WQY|1|AA|G|2282
4WQY|1|AA|G|2283
4WQY|1|AA|U|2284
4WQY|1|AA|A|2285
4WQY|1|AA|A|2286
4WQY|1|AA|C|2287
4WQY|1|AA|G|2288

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A0

50S ribosomal protein L27

Chain AB

5S ribosomal RNA; 5S rRNA

Chain AQ

50S ribosomal protein L16