HL_4WQY_137

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCGUAAUAGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_137 not in the Motif Atlas

Homologous match to HL_5J7L_212

Geometric discrepancy: 0.2196

The information below is about HL_5J7L_212

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

4WQY|1|CA|G|1091
4WQY|1|CA|C|1092
4WQY|1|CA|G|1093
4WQY|1|CA|U|1094
4WQY|1|CA|A|1095
4WQY|1|CA|A|1096
4WQY|1|CA|U|1097
4WQY|1|CA|A|1098
4WQY|1|CA|G|1099
4WQY|1|CA|C|1100

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C9

50S ribosomal protein L36

Chain CH

50S ribosomal protein L6

Chain CL

50S ribosomal protein L11

Chain DZ

50S ribosomal protein L9,Elongation factor G