HL_4WQY_156

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

4WQY|1|CA|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_156 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.2057

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4WQY|1|CA|G|1910
4WQY|1|CA|U|1911
4WQY|1|CA|A|1912
4WQY|1|CA|A|1913
4WQY|1|CA|C|1914
4WQY|1|CA|U|1915
4WQY|1|CA|A|1916
4WQY|1|CA|U|1917
4WQY|1|CA|A|1918
4WQY|1|CA|A|1919
4WQY|1|CA|C|1920

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain DA

Small subunit ribosomal RNA; SSU rRNA

Chain DX

Transfer RNA; tRNA

Chain DZ

50S ribosomal protein L9,Elongation factor G