HL_4WQY_212
3D structure
- PDB id
- 4WQY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CAGCCUGUAG*G
- Length
- 11 nucleotides
- Bulged bases
- 4WQY|1|DX|C|16, 4WQY|1|DX|C|17, 4WQY|1|DX|U|17|||A, 4WQY|1|DX|G|18, 4WQY|1|DX|U|20
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQY_212 not in the Motif Atlas
- Homologous match to HL_4TUE_033
- Geometric discrepancy: 0.19
- The information below is about HL_4TUE_033
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_93616.2
- Basepair signature
- cWW-cWS-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4WQY|1|DX|C|13
4WQY|1|DX|A|14
4WQY|1|DX|G|15
4WQY|1|DX|C|16
4WQY|1|DX|C|17
4WQY|1|DX|U|17|||A
4WQY|1|DX|G|18
4WQY|1|DX|U|20
4WQY|1|DX|A|21
4WQY|1|DX|G|22
*
4WQY|1|DX|G|22
Current chains
- Chain DX
- P-site tRNA
Nearby chains
- Chain CA
- Large subunit ribosomal RNA; LSU rRNA
- Chain CG
- 50S ribosomal protein L5
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