HL_4WQY_223
3D structure
- PDB id
- 4WQY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- CGGCAACG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQY_223 not in the Motif Atlas
- Geometric match to HL_3RG5_006
- Geometric discrepancy: 0.2941
- The information below is about HL_3RG5_006
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_45359.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
4WQY|1|DA|C|1264
4WQY|1|DA|G|1265
4WQY|1|DA|G|1266
4WQY|1|DA|C|1267
4WQY|1|DA|A|1268
4WQY|1|DA|A|1269
4WQY|1|DA|C|1270
4WQY|1|DA|G|1271
Current chains
- Chain DA
- 16S Ribosomal RNA
Nearby chains
- Chain DM
- 30S ribosomal protein S13
- Chain DS
- 30S ribosomal protein S19
- Chain DU
- 30S ribosomal protein Thx
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