HL_4WR6_226
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GACUGUAAAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WR6_226 not in the Motif Atlas
- Geometric match to HL_4WT8_246
- Geometric discrepancy: 0.3998
- The information below is about HL_4WT8_246
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36684.3
- Basepair signature
- cWW-F-F-F-F-cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4WR6|1|3L|G|31||||P_1
4WR6|1|3L|A|32||||P_1
4WR6|1|3L|C|33||||P_1
4WR6|1|3L|U|34||||P_1
4WR6|1|3L|G|35||||P_1
4WR6|1|3L|U|36||||P_1
4WR6|1|3L|A|37||||P_1
4WR6|1|3L|A|38||||P_1
4WR6|1|3L|A|39||||P_1
4WR6|1|3L|U|40||||P_1
4WR6|1|3L|C|41||||P_1
Current chains
- Chain 3L
- tRNA-Tyr
Nearby chains
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 2A
- 30S ribosomal protein S11
- Chain 2L
- Transfer RNA; tRNA
- Chain 4L
- mRNA
- Chain 62
- 30S ribosomal protein S7
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